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    CG5399 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41900, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG5399provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038353
    Locus tag
    Dmel_CG5399
    See related
    AllianceGenome:FB:FBgn0038353
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5399
    Orthologs
    all
    NEW
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    Genomic context

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    See CG5399 in Genome Data Viewer
    Location:
    89A2-89A2; 3-58 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15695241..15697142)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11520963..11522864)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43849 Neighboring gene pxb Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45635 Neighboring gene long non-coding RNA:CR45636

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pooled genome-wide CRISPR activation screening for rapamycin resistance genes in Drosophila cells. Xia B, et al. Elife, 2023 Apr 20. PMID 37078570, Free PMC Article
    2. The bHLH Transcription Factor Hand Regulates the Expression of Genes Critical to Heart and Muscle Function in Drosophila melanogaster. Hallier B, et al. PLoS One, 2015. PMID 26252215, Free PMC Article
    3. Cyclin-dependent kinase 8 module expression profiling reveals requirement of mediator subunits 12 and 13 for transcription of Serpent-dependent innate immunity genes in Drosophila. Kuuluvainen E, et al. J Biol Chem, 2014 Jun 6. PMID 24778181, Free PMC Article
    4. Single-cell RNA sequencing identifies novel cell types in Drosophila blood. Fu Y, et al. J Genet Genomics, 2020 Apr 20. PMID 32487456, Free PMC Article
    5. Drosophila p53 directs nonapoptotic programs in postmitotic tissue. Kurtz P, et al. Mol Biol Cell, 2019 May 15. PMID 30892991, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5399-PA
    CG5399-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      15695241..15697142
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275682.1 → NP_001262611.1  uncharacterized protein Dmel_CG5399, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262611.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VF46

    2. NM_142224.2 → NP_650481.1  uncharacterized protein Dmel_CG5399, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650481.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VF46
      Related
      FBpp0082618
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VF46 Q9VF46

    Gene LinkOut

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