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    GatB Glutamyl-tRNA amidotransferase, subunit B [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42861, updated on 9-Dec-2024

    Summary

    Official Symbol
    GatBprovided by FlyBase
    Official Full Name
    Glutamyl-tRNA amidotransferase, subunit Bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039153
    Locus tag
    Dmel_CG5463
    See related
    AllianceGenome:FB:FBgn0039153
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5463; Dmel\CG5463
    Summary
    Predicted to enable glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity. Predicted to be involved in glutaminyl-tRNAGln biosynthesis via transamidation and mitochondrial translation. Predicted to be part of glutamyl-tRNA(Gln) amidotransferase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 41. Orthologous to human GATB (glutamyl-tRNA amidotransferase subunit B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See GatB in Genome Data Viewer
    Location:
    95E1-95E1; 3-83 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24128049..24130255, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19953771..19955977, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene transfer RNA:Leucine-TAA 2-1 Neighboring gene uncharacterized protein Neighboring gene Rootletin Neighboring gene Tsc1 Neighboring gene Secretory 10

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in glutaminyl-tRNAGln biosynthesis via transamidation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in glutaminyl-tRNAGln biosynthesis via transamidation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in mitochondrial translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of glutamyl-tRNA(Gln) amidotransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of glutamyl-tRNA(Gln) amidotransferase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    Glutamyl-tRNA amidotransferase, subunit B
    Names
    CG5463-PA
    GatB-PA
    glutamyl-tRNA amidotransferase subunit B
    NP_651217.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24128049..24130255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142960.4NP_651217.2  Glutamyl-tRNA amidotransferase, subunit B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651217.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VCD0
      UniProtKB/TrEMBL
      Q8IGR5
      Related
      FBpp0083969
      Conserved Domains (1) summary
      COG0064
      Location:19512
      GatB; Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit [Translation, ribosomal structure and biogenesis]