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    CG11905 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39895, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11905provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036678
    Locus tag
    Dmel_CG11905
    See related
    AllianceGenome:FB:FBgn0036678
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11905
    Summary
    Is expressed in several structures, including embryonic dorsal epidermis; embryonic head epidermis; embryonic/larval posterior spiracle; primary segmental tracheal branch primordium; and primary tracheal branch. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11905 in Genome Data Viewer
    Location:
    73D6-73D7; 3-45 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16928381..16935536, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16921481..16928636, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Limpet Neighboring gene long non-coding RNA:CR45898 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cuticular protein 73D Neighboring gene Odorant-binding protein 73a Neighboring gene Oxoglutarate dehydrogenase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of genetic suppressors of the Sin3A knockdown wing phenotype. Swaminathan A, et al. PLoS One, 2012. PMID 23166712, Free PMC Article
    2. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
    3. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article
    4. A microtubule interactome: complexes with roles in cell cycle and mitosis. Hughes JR, et al. PLoS Biol, 2008 Apr 22. PMID 18433294, Free PMC Article
    5. Nociceptor-Enriched Genes Required for Normal Thermal Nociception. Honjo K, et al. Cell Rep, 2016 Jul 12. PMID 27346357, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11905-PA
    CG11905-PB
    CG11905-PC
    CG11905-PD
    CG11905-PE
    CG11905-PF
    CG11905-PG
    CG11905-PH
    CG11905-PI
    CG11905-PL

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16928381..16935536 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168695.4 → NP_730215.2  uncharacterized protein Dmel_CG11905, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730215.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGK1, Q8IQQ2
      Related
      FBpp0075060
      Conserved Domains (1) summary
      pfam15999
      Location:249 → 305
      DUF4774; Domain of unknown function (DUF4774)

    2. NM_001259880.2 → NP_001246809.1  uncharacterized protein Dmel_CG11905, isoform L [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246809.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NFI4
      Conserved Domains (1) summary
      pfam15999
      Location:250 → 306
      DUF4774; Domain of unknown function (DUF4774)

    3. NM_001104155.3 → NP_001097625.1  uncharacterized protein Dmel_CG11905, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097625.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGK1, Q8IQQ2
      Conserved Domains (1) summary
      pfam15999
      Location:249 → 305
      DUF4774; Domain of unknown function (DUF4774)

    4. NM_168696.4 → NP_730216.2  uncharacterized protein Dmel_CG11905, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730216.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGK1, Q8IQQ2
      Related
      FBpp0075065
      Conserved Domains (1) summary
      pfam15999
      Location:249 → 305
      DUF4774; Domain of unknown function (DUF4774)

    5. NM_168697.4 → NP_730217.1  uncharacterized protein Dmel_CG11905, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730217.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IQQ1
      Related
      FBpp0075061
      Conserved Domains (1) summary
      pfam15999
      Location:251 → 308
      DUF4774; Domain of unknown function (DUF4774)

    6. NM_001104154.3 → NP_001097624.1  uncharacterized protein Dmel_CG11905, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097624.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IQQ1
      Conserved Domains (1) summary
      pfam15999
      Location:251 → 308
      DUF4774; Domain of unknown function (DUF4774)

    7. NM_168698.4 → NP_730218.1  uncharacterized protein Dmel_CG11905, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730218.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IQQ1
      Related
      FBpp0075064
      Conserved Domains (1) summary
      pfam15999
      Location:251 → 308
      DUF4774; Domain of unknown function (DUF4774)

    8. NM_168700.3 → NP_730220.1  uncharacterized protein Dmel_CG11905, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730220.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TR5, Q9VVC1
      Related
      FBpp0075062
      Conserved Domains (1) summary
      pfam15999
      Location:495 → 549
      DUF4774; Domain of unknown function (DUF4774)

    9. NM_140679.4 → NP_648936.1  uncharacterized protein Dmel_CG11905, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648936.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TR5, Q9VVC1
      Related
      FBpp0075063
      Conserved Domains (1) summary
      pfam15999
      Location:495 → 549
      DUF4774; Domain of unknown function (DUF4774)

    10. NM_168699.3 → NP_730219.1  uncharacterized protein Dmel_CG11905, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730219.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TR5, Q9VVC1
      Related
      FBpp0075066
      Conserved Domains (1) summary
      pfam15999
      Location:495 → 549
      DUF4774; Domain of unknown function (DUF4774)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9NFI4 M9NFI4
    Q8IGK1 Q8IGK1
    Q8IQQ1 Q8IQQ1
    Q9VVC1 Q9VVC1

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