U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG9166 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38161, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG9166provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029514
    Locus tag
    Dmel_CG9166
    See related
    AllianceGenome:FB:FBgn0029514
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    312; BEST:CK01660; Dmel\CG9166
    Summary
    Predicted to enable ribosomal large subunit binding activity. Predicted to be involved in negative regulation of ribosome biogenesis and negative regulation of translation. Predicted to be active in mitochondrion. Is expressed in organism. Orthologous to human MALSU1 (mitochondrial assembly of ribosomal large subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG9166 in Genome Data Viewer
    Location:
    61F7-61F7; 3-0 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1351116..1352853)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1351116..1352853)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Hydroxymethylbilane synthase Neighboring gene indra Neighboring gene Protein tyrosine phosphatase 61F Neighboring gene transfer RNA:Glutamic acid-CTC 3-1 Neighboring gene transfer RNA:Glutamic acid-CTC 3-2 Neighboring gene roughoid

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Affecting Rhomboid-3 function causes a dilated heart in adult Drosophila. Yu L, et al. PLoS Genet, 2010 May 27. PMID 20523889, Free PMC Article
    2. Functional genomic analysis of the 61D-61F region of the third chromosome of Drosophila melanogaster. Wei HC, et al. Genome, 2003 Dec. PMID 14663523
    3. In vivo profiling of the Zucchini proximal proteome in the Drosophila ovary. Nguyen TTM, et al. Development, 2023 Feb 15. PMID 36762624
    4. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ribosomal large subunit binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of ribosome biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in negative regulation of translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    312
    CG9166-PA
    CG9166-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      1351116..1352853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_138261.3 → NP_612105.1  uncharacterized protein Dmel_CG9166, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_612105.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U3Y9, Q9W0F9
      Related
      FBpp0072573
      Conserved Domains (1) summary
      pfam02410
      Location:105 → 204
      RsfS; Ribosomal silencing factor during starvation

    2. NM_001274325.1 → NP_001261254.1  uncharacterized protein Dmel_CG9166, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261254.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U3Y9, Q9W0F9
      Conserved Domains (1) summary
      pfam02410
      Location:105 → 204
      RsfS; Ribosomal silencing factor during starvation
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9U3Y9 Q9U3Y9
    Q9W0F9 Q9W0F9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools