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    Vps51 Vacuolar protein sorting 51 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37156, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vps51provided by FlyBase
    Official Full Name
    Vacuolar protein sorting 51provided by FlyBase
    Primary source
    FLYBASE:FBgn0034380
    Locus tag
    Dmel_CG15087
    See related
    AllianceGenome:FB:FBgn0034380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15087; Dmel\CG15087
    Summary
    Predicted to be involved in several processes, including Golgi organization; endosomal transport; and lysosomal transport. Predicted to be part of EARP complex and GARP complex. Predicted to be active in membrane. Is expressed in adult head; organism; and spermatozoon. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia type 13. Orthologous to human VPS51 (VPS51 subunit of GARP complex). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Vps51 in Genome Data Viewer
    Location:
    55E9-55E9; 2-86 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18708152..18710865, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14595657..14598370, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Salt-inducible kinase 3 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR33942 Neighboring gene uncharacterized protein Neighboring gene Heparan sulfate 3-O sulfotransferase-A Neighboring gene mir-4982 stem loop

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Golgi vesicle transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endocytic recycling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endocytic recycling ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in lysosomal transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in retrograde transport, endosome to Golgi IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of EARP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of GARP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of GARP complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    vacuolar protein sorting 51
    Names
    CG15087-PA
    Vps51-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18708152..18710865 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137519.3NP_611363.2  vacuolar protein sorting 51 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611363.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8MSY4, Q9V8L5
      Related
      FBpp0085829
      Conserved Domains (2) summary
      pfam08700
      Location:1195
      Vps51; Vps51/Vps67
      cl19297
      Location:51210
      Dor1; Dor1-like family