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    taf1d.L TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 443660, updated on 7-Jan-2025

    Summary

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    Official Symbol
    taf1d.L
    Official Full Name
    TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa L homeolog
    Primary source
    Xenbase:XB-GENE-17343555
    Locus tag
    XELAEV_18012791mg
    See related
    EnsemblRapid:ENSXLAG00005002911
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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    Genomic context

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    See taf1d.L in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (104123472..104133629, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (98408845..98417525, complement)

    Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene dynein beta chain, flagellar outer arm L homeolog Neighboring gene chromosome 2 C11orf54 homolog L homeolog Neighboring gene small nucleolar RNA SNORA40 Neighboring gene uncharacterized LOC108708348 Neighboring gene small nucleolar RNA SNORA18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    TATA box-binding protein-associated factor RNA polymerase I subunit D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      104123472..104133629 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041582268.1 → XP_041438202.1  TATA box-binding protein-associated factor RNA polymerase I subunit D

      UniProtKB/TrEMBL
      A0A8J1M929, A0A974DQI6
      Related
      ENSXLAP00005008671.1, ENSXLAT00005008797.1
    Nucleotide Protein Strain
    Heading Accession and Version

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