U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RCR1 Rcr1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852290, updated on 9-Dec-2024

    Summary

    Official Symbol
    RCR1
    Official Full Name
    Rcr1p
    Primary source
    SGD:S000000209
    Locus tag
    YBR005W
    See related
    AllianceGenome:SGD:S000000209; FungiDB:YBR005W; VEuPathDB:YBR005W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    SSH6
    Summary
    Enables protein-membrane adaptor activity. Involved in chitin localization; protein localization to plasma membrane; and vesicle-mediated transport. Located in endoplasmic reticulum membrane. Is active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See RCR1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_001134.8 (245906..246547)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene trans-hexaprenyltranstransferase Neighboring gene GPI-anchor transamidase GPI18 Neighboring gene succinate-semialdehyde dehydrogenase (NAD(P)(+)) Neighboring gene Dsf2p

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables protein-membrane adaptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chitin localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein localization to plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle-mediated transport IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Rcr1p
    NP_009559.1
    • Plasma membrane (PM) ubiquitin ligase-substrate adaptor; involved in cell wall chitin deposition; ubiquitinates and down-regulates chitin synthase Chs3p abundance at PM via calcineurin/Crz1 signaling pathway which regulates RCR1 expression; delivered to PM by exomer complex using novel PM sorting motif; RCR1 has a paralog, RCR2, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      245906..246547
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178353.1NP_009559.1  TPA: Rcr1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009559.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VQ06, P38212
      UniProtKB/TrEMBL
      C7GM44, N1P864
      Conserved Domains (1) summary
      pfam12273
      Location:42155
      RCR; Chitin synthesis regulation, resistance to Congo red