U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Atp5po ATP synthase peripheral stalk subunit OSCP [ Mus musculus (house mouse) ]

    Gene ID: 28080, updated on 27-Nov-2024

    Summary

    Official Symbol
    Atp5poprovided by MGI
    Official Full Name
    ATP synthase peripheral stalk subunit OSCPprovided by MGI
    Primary source
    MGI:MGI:106341
    See related
    Ensembl:ENSMUSG00000022956 AllianceGenome:MGI:106341
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ATPO; OSCP; Atp5o; D12Wsu28e
    Summary
    Predicted to enable estradiol binding activity. Predicted to contribute to ATP hydrolysis activity and proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Located in mitochondrion and myelin sheath. Is expressed in several structures, including alimentary system; cardiovascular system; genitourinary system; integumental system; and nervous system. Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 7. Orthologous to human ATP5PO (ATP synthase peripheral stalk subunit OSCP). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in heart adult (RPKM 233.2), placenta adult (RPKM 134.9) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Atp5po in Genome Data Viewer
    Location:
    16 C4; 16 53.26 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (91722111..91728518, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (91925223..91931630, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene intersectin 1 (SH3 domain protein 1A) Neighboring gene predicted gene, 52262 Neighboring gene STARR-positive B cell enhancer ABC_E7476 Neighboring gene predicted gene, 25245 Neighboring gene STARR-seq mESC enhancer starr_41493 Neighboring gene RIKEN cDNA D430001F17 gene Neighboring gene predicted gene, 36797

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in myelin sheath HDA PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of proton-transporting ATP synthase complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of proton-transporting ATP synthase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of proton-transporting ATP synthase complex, coupling factor F(o) ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ATP synthase subunit O, mitochondrial
    Names
    ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
    ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit; DNA segment, Chr 12, Wayne State University 28, expressed
    oligomycin sensitivity conferral protein
    NP_613063.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138597.2NP_613063.1  ATP synthase subunit O, mitochondrial precursor

      See identical proteins and their annotated locations for NP_613063.1

      Status: PROVISIONAL

      Source sequence(s)
      AC126053
      Consensus CDS
      CCDS28331.1
      UniProtKB/Swiss-Prot
      Q9DB20
      UniProtKB/TrEMBL
      Q3TF25, Q3THG0
      Related
      ENSMUSP00000023677.4, ENSMUST00000023677.10
      Conserved Domains (1) summary
      pfam00213
      Location:37209
      OSCP; ATP synthase delta (OSCP) subunit

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      91722111..91728518 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)