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    Gab1 growth factor receptor bound protein 2-associated protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 14388, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gab1provided by MGI
    Official Full Name
    growth factor receptor bound protein 2-associated protein 1provided by MGI
    Primary source
    MGI:MGI:108088
    See related
    Ensembl:ENSMUSG00000031714 AllianceGenome:MGI:108088
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Enables signaling adaptor activity. Involved in epidermal growth factor receptor signaling pathway; positive regulation of blood vessel endothelial cell migration; and vascular endothelial growth factor signaling pathway. Acts upstream of or within several processes, including cell surface receptor signaling pathway; labyrinthine layer development; and positive regulation of MAP kinase activity. Located in cytoplasm. Is active in cell cortex. Is expressed in several structures, including brain; gonad; gut; hemolymphoid system gland; and inner ear. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 26. Orthologous to human GAB1 (GRB2 associated binding protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in placenta adult (RPKM 12.3), lung adult (RPKM 10.9) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gab1 in Genome Data Viewer
    Location:
    8 C2; 8 38.47 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (81491060..81607151, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (80764431..80880519, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene Fras1 related extracellular matrix protein 3 Neighboring gene STARR-seq mESC enhancer starr_22039 Neighboring gene SNF2 related chromatin remodeling ATPase 5 Neighboring gene STARR-seq mESC enhancer starr_22040 Neighboring gene STARR-positive B cell enhancer ABC_E8847 Neighboring gene lactate dehydrogenase A pseudogene Neighboring gene predicted gene, 51580 Neighboring gene STARR-seq mESC enhancer starr_22044 Neighboring gene STARR-seq mESC enhancer starr_22045 Neighboring gene STARR-seq mESC enhancer starr_22049 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 31223

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (10)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables signaling adaptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables signaling adaptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables signaling adaptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of MAPK cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in angiogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to vascular endothelial growth factor stimulus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in endothelial cell chemotaxis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within epidermal growth factor receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in epidermal growth factor receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within epidermis development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within heart development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within interleukin-6-mediated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within labyrinthine layer development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within platelet-derived growth factor receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of MAP kinase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of MAPK cascade IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of MAPK cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of angiogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of blood vessel endothelial cell migration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within regulation of cell migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in response to hepatocyte growth factor ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within response to oxidative stress IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in vascular endothelial growth factor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in vascular endothelial growth factor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cell cortex IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    located_in cell-cell junction ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    GRB2-associated-binding protein 1
    Names
    GRB2-associated binder 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001301298.2NP_001288227.1  GRB2-associated-binding protein 1 isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)
      Source sequence(s)
      AC116800, AC132606
      Consensus CDS
      CCDS85569.1
      UniProtKB/TrEMBL
      A0A1B0GS41, A0AAQ4VMS5
      Related
      ENSMUSP00000147784.2, ENSMUST00000210676.2
      Conserved Domains (2) summary
      cd01266
      Location:3125
      PH_Gab1_Gab2; Grb2-associated binding proteins 1 and 2 pleckstrin homology (PH) domain
      pfam00169
      Location:6115
      PH; PH domain
    2. NM_001424818.1NP_001411747.1  GRB2-associated-binding protein 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC116800, AC132606
      UniProtKB/TrEMBL
      A0AAQ4VMS5
    3. NM_001424819.1NP_001411748.1  GRB2-associated-binding protein 1 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC116800, AC132606
      UniProtKB/TrEMBL
      A0AAQ4VMS5
    4. NM_001424820.1NP_001411749.1  GRB2-associated-binding protein 1 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC116800, AC132606
      UniProtKB/TrEMBL
      A0AAQ4VMS5, A0AAQ4VMS8
    5. NM_001424821.1NP_001411750.1  GRB2-associated-binding protein 1 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC116800, AC132606
      UniProtKB/TrEMBL
      A0AAQ4VMS5, A0AAQ4VMS8
      Related
      ENSMUSP00000159976.1, ENSMUST00000249879.1
    6. NM_021356.3NP_067331.2  GRB2-associated-binding protein 1 isoform 2

      See identical proteins and their annotated locations for NP_067331.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an in-frame exon in the 3' coding region compared to variant 1. The encoded isoform (2) is shorter than variant 1.
      Source sequence(s)
      AC116800, AC132606
      Consensus CDS
      CCDS22443.1
      UniProtKB/Swiss-Prot
      Q91VW7, Q9QYY0
      UniProtKB/TrEMBL
      A0AAQ4VMS5, Q505A4
      Related
      ENSMUSP00000034150.9, ENSMUST00000034150.10
      Conserved Domains (2) summary
      cd01266
      Location:3125
      PH_Gab1_Gab2; Grb2-associated binding proteins 1 and 2 pleckstrin homology (PH) domain
      pfam00169
      Location:6115
      PH; PH domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      81491060..81607151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530677.4XP_006530740.1  GRB2-associated-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0AAQ4VMS5
    2. XM_017312576.3XP_017168065.1  GRB2-associated-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAQ4VMS5, A0AAQ4VMS8
      Conserved Domains (1) summary
      cl17171
      Location:122
      PH-like; Pleckstrin homology-like domain
    3. XM_011248309.3XP_011246611.1  GRB2-associated-binding protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011246611.1

      UniProtKB/TrEMBL
      A0AAQ4VMS5, A0AAQ4VMS8
      Related
      ENSMUSP00000159977.1, ENSMUST00000249880.1
      Conserved Domains (1) summary
      cl17171
      Location:122
      PH-like; Pleckstrin homology-like domain
    4. XM_011248310.4XP_011246612.1  GRB2-associated-binding protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011246612.1

      UniProtKB/TrEMBL
      A0AAQ4VMS5, A0AAQ4VMS8
      Conserved Domains (1) summary
      cl17171
      Location:122
      PH-like; Pleckstrin homology-like domain