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    5530400C23Rik RIKEN cDNA 5530400C23 gene [ Mus musculus (house mouse) ]

    Gene ID: 232426, updated on 9-Dec-2024

    Summary

    Official Symbol
    5530400C23Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 5530400C23 geneprovided by MGI
    Primary source
    MGI:MGI:1918650
    See related
    Ensembl:ENSMUSG00000055594 AllianceGenome:MGI:1918650
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GRP
    Summary
    Predicted to enable hydroxyapatite binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See 5530400C23Rik in Genome Data Viewer
    Location:
    6 G1; 6 64.03 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (133269179..133272753)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (133292216..133295790)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11338 Neighboring gene small integral membrane protein 10 like 1 Neighboring gene STARR-seq mESC enhancer starr_17521 Neighboring gene calmodulin 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17522 Neighboring gene STARR-seq mESC enhancer starr_17523 Neighboring gene predicted gene, 34149 Neighboring gene STARR-seq mESC enhancer starr_17524 Neighboring gene STARR-seq mESC enhancer starr_17527 Neighboring gene STARR-seq mESC enhancer starr_17528 Neighboring gene predicted gene 5885

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hydroxyapatite binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC232426
    Names
    submandibular gland secretory Glx-rich protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027784.1NP_082060.1  uncharacterized protein LOC232426 precursor

      See identical proteins and their annotated locations for NP_082060.1

      Status: VALIDATED

      Source sequence(s)
      AC126261
      Consensus CDS
      CCDS51935.1
      UniProtKB/TrEMBL
      Q9D3I0
      Related
      ENSMUSP00000035635.7, ENSMUST00000048459.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      133269179..133272753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)