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    B3galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [ Mus musculus (house mouse) ]

    Gene ID: 26878, updated on 9-Dec-2024

    Summary

    Official Symbol
    B3galt2provided by MGI
    Official Full Name
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2provided by MGI
    Primary source
    MGI:MGI:1349461
    See related
    Ensembl:ENSMUSG00000033849 AllianceGenome:MGI:1349461
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity. Acts upstream of or within oligosaccharide biosynthetic process. Predicted to be active in Golgi membrane. Is expressed in several structures, including alimentary system; brain; male reproductive gland or organ; respiratory system; and sensory organ. Orthologous to human B3GALT2 (beta-1,3-galactosyltransferase 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 7.4), genital fat pad adult (RPKM 6.8) and 12 other tissues See more
    Orthologs
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    Genomic context

    See B3galt2 in Genome Data Viewer
    Location:
    1 F; 1 62.52 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (143516435..143525675)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (143640697..143649937)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 35244 Neighboring gene STARR-seq mESC enhancer starr_02523 Neighboring gene STARR-seq mESC enhancer starr_02525 Neighboring gene STARR-seq mESC enhancer starr_02526 Neighboring gene predicted gene, 35303 Neighboring gene cell division cycle 73, Paf1/RNA polymerase II complex component Neighboring gene STARR-positive B cell enhancer ABC_E7755 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene predicted gene, 38658

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    General protein information

    Preferred Names
    beta-1,3-galactosyltransferase 2
    Names
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase-II
    beta-1,3-GalTase 2
    beta3Gal-T2
    beta3GalT2
    NP_064409.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020025.4NP_064409.3  beta-1,3-galactosyltransferase 2

      See identical proteins and their annotated locations for NP_064409.3

      Status: VALIDATED

      Source sequence(s)
      AK034371, AK036141, AK038860, BB370382
      Consensus CDS
      CCDS15342.1
      UniProtKB/Swiss-Prot
      O54905, Q8BH19, Q8CBX4, Q91V19, Q91V58, Q91VE9, Q920V3, Q920V4
      Related
      ENSMUSP00000046118.3, ENSMUST00000038252.4
      Conserved Domains (1) summary
      pfam01762
      Location:165359
      Galactosyl_T; Galactosyltransferase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      143516435..143525675
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)