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    C230037L18Rik RIKEN cDNA C230037L18 gene [ Mus musculus (house mouse) ]

    Gene ID: 100532730, updated on 22-Oct-2024

    Summary

    Official Symbol
    C230037L18Rikprovided by MGI
    Official Full Name
    RIKEN cDNA C230037L18 geneprovided by MGI
    Primary source
    MGI:MGI:3697701
    See related
    Ensembl:ENSMUSG00000084915 AllianceGenome:MGI:3697701
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Broad expression in lung adult (RPKM 19.7), mammary gland adult (RPKM 17.6) and 16 other tissues See more
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    Genomic context

    See C230037L18Rik in Genome Data Viewer
    Location:
    15 E3; 15 44.94 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (89360455..89369053)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (89476252..89484850)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA C730034F03 gene Neighboring gene STARR-positive B cell enhancer ABC_E9159 Neighboring gene mitogen-activated protein kinase 8 interacting protein 2 Neighboring gene arylsulfatase A Neighboring gene STARR-seq mESC enhancer starr_39466 Neighboring gene SH3 and multiple ankyrin repeat domains 3 Neighboring gene predicted gene 15609 Neighboring gene predicted gene, 36221

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_077233.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC137513, AK082325, BY210314
      Related
      ENSMUST00000344811.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      89360455..89369053
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)