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    Iqcc IQ motif containing C [ Mus musculus (house mouse) ]

    Gene ID: 230767, updated on 27-Nov-2024

    Summary

    Official Symbol
    Iqccprovided by MGI
    Official Full Name
    IQ motif containing Cprovided by MGI
    Primary source
    MGI:MGI:2446212
    See related
    Ensembl:ENSMUSG00000040795 AllianceGenome:MGI:2446212
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Orthologous to human IQCC (IQ motif containing C). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 6.1), testis adult (RPKM 6.0) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Iqcc in Genome Data Viewer
    Location:
    4 D2.2; 4 63.26 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (129508919..129512969, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (129615617..129619093, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3, subunit I Neighboring gene transmembrane protein 234 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:129287304-129287568 Neighboring gene doublecortin domain containing 2b Neighboring gene STARR-positive B cell enhancer ABC_E10261 Neighboring gene coiled coil domain containing 28B Neighboring gene STARR-seq mESC enhancer starr_11504 Neighboring gene predicted gene, 34305 Neighboring gene taxilin alpha Neighboring gene STARR-positive B cell enhancer ABC_E1283

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Clone Names

    • MGC28034

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    IQ domain-containing protein C

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001426288.1NP_001413217.1  IQ domain-containing protein C isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL671759
    2. NM_001426289.1NP_001413218.1  IQ domain-containing protein C isoform 3

      Status: VALIDATED

      Source sequence(s)
      AL671759
    3. NM_001426290.1NP_001413219.1  IQ domain-containing protein C isoform 3

      Status: VALIDATED

      Source sequence(s)
      AL671759
    4. NM_198026.3NP_932143.2  IQ domain-containing protein C isoform 1

      See identical proteins and their annotated locations for NP_932143.2

      Status: VALIDATED

      Source sequence(s)
      AL671759
      Consensus CDS
      CCDS38886.1
      UniProtKB/Swiss-Prot
      A2ADZ8, Q8K0F9, Q8R0F4
      Related
      ENSMUSP00000040584.6, ENSMUST00000046675.12

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      129508919..129512969 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036164054.1XP_036019947.1  IQ domain-containing protein C isoform X3