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    PF3D7_1330600 elongation factor Tu, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813717, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1330600
    Gene description
    elongation factor Tu, putative
    Locus tag
    PF3D7_1330600
    See related
    PlasmoDB:PF3D7_1330600; VEuPathDB:PF3D7_1330600
    Gene type
    protein coding
    RNA name
    elongation factor Tu, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1330600 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_004331.3 (1287891..1289408, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene ER lumen protein retaining receptor 1, putative Neighboring gene CTLH domain-containing protein, putative Neighboring gene GPI transamidase subunit PIG-U, putative Neighboring gene RNA-binding protein, putative Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein translation in Plasmodium parasites. Jackson KE, et al. Trends Parasitol, 2011 Oct. PMID 21741312
    2. Interaction of apicoplast-encoded elongation factor (EF) EF-Tu with nuclear-encoded EF-Ts mediates translation in the Plasmodiumfalciparum plastid. Biswas S, et al. Int J Parasitol, 2011 Mar. PMID 21163263
    3. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    4. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Our data indicate that translation elongation in the apicoplast is facilitated by the plastid-encoded EF-Tu in combination with a nuclear-encoded but apicoplast-targeted EF-T.
      Title: Interaction of apicoplast-encoded elongation factor (EF) EF-Tu with nuclear-encoded EF-Ts mediates translation in the Plasmodiumfalciparum plastid.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables GTP binding ISM
    Inferred from Sequence Model
    more info
    		  
    enables mRNA binding HDA PubMed 
    enables translation elongation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within translational elongation ISM
    Inferred from Sequence Model
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in mitochondrion RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    elongation factor Tu, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      1287891..1289408 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350003.1 → XP_001350039.1  elongation factor Tu, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350039.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V2W6, A0A024VG82, A0A024W2M7, A0A024WLJ5, A0A024X3Q9, A0A0L1I4A1, A0A0L7KDR8, A0A0L7M7I9, Q8IE20, W4IBN9, W4IX38, W7F9W7, W7FUH0, W7JSW0, W7KB24
      Conserved Domains (1) summary
      PRK00049
      Location:115 → 505
      PRK00049; elongation factor Tu; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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