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    PF3D7_1346300 DNA/RNA-binding protein Alba 2 [ Plasmodium falciparum 3D7 ]

    Gene ID: 813792, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1346300
    Gene description
    DNA/RNA-binding protein Alba 2
    Locus tag
    PF3D7_1346300
    See related
    PlasmoDB:PF3D7_1346300; VEuPathDB:PF3D7_1346300
    Gene type
    protein coding
    RNA name
    DNA/RNA-binding protein Alba 2
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1346300 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    3
    Sequence:
    Chromosome: 13; NC_004331.3 (1849528..1850517)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene protein transport protein SEC61 subunit alpha Neighboring gene nuclear import protein MOG1, putative Neighboring gene VPS13 domain-containing protein, putative Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites. Chêne A, et al. Nucleic Acids Res, 2012 Apr. PMID 22167473, Free PMC Article
    2. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    3. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
    4. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    5. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables RNA binding HDA PubMed 
    enables RNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables mRNA binding HDA PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA/RNA-binding protein Alba 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      1849528..1850517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350141.1 → XP_001350177.1  DNA/RNA-binding protein Alba 2 [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350177.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8IDN4
      UniProtKB/TrEMBL
      A0A2I0BWC8, W4IBT4, W4IZZ4, W7F303
      Conserved Domains (1) summary
      pfam01918
      Location:13 → 73
      Alba
    Nucleotide Protein
    Heading Accession and Version

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