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    PF3D7_0821800 protein transport protein SEC61 subunit beta, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 2655350, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0821800
    Gene description
    protein transport protein SEC61 subunit beta, putative
    Locus tag
    PF3D7_0821800
    See related
    PlasmoDB:PF3D7_0821800; VEuPathDB:PF3D7_0821800
    Gene type
    protein coding
    RNA name
    protein transport protein SEC61 subunit beta, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0821800 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Sequence:
    Chromosome: 8; NC_004329.3 (976074..976644)

    Chromosome 8 - NC_004329.3Genomic Context describing neighboring genes Neighboring gene polyribonucleotide 5'-hydroxyl-kinase Clp1, putative Neighboring gene 60S ribosomal protein L22, putative Neighboring gene conserved protein, unknown function Neighboring gene ribosomal protein L4, mitochondrial, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004329.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High resolution microscopy reveals an unusual architecture of the Plasmodium berghei endoplasmic reticulum. Kaiser G, et al. Mol Microbiol, 2016 Dec. PMID 27566438
    2. Unraveling the components of protein translocation pathway in human malaria parasite Plasmodium falciparum. Tuteja R. Arch Biochem Biophys, 2007 Nov 15. PMID 17919451
    3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within protein transport by the Sec complex RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Sec61 translocon complex RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    protein transport protein SEC61 subunit beta, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004329.3 Reference assembly

      Range
      976074..976644
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002808820.1 → XP_002808866.1  protein transport protein SEC61 subunit beta, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_002808866.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024W833, A0A024WS79, A0A024X906, A0A0L1IGD0, A0A2I0BXR5, C0H4W6, W4IRV1, W7FP31, W7JDU5, W7K7R3
      Conserved Domains (1) summary
      pfam03911
      Location:41 → 77
      Sec61_beta; Sec61beta family
    Nucleotide Protein
    Heading Accession and Version

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