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    PF3D7_0730300 AP2 domain transcription factor AP2-L, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 2655179, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0730300
    Gene description
    AP2 domain transcription factor AP2-L, putative
    Locus tag
    PF3D7_0730300
    See related
    PlasmoDB:PF3D7_0730300; VEuPathDB:PF3D7_0730300
    Gene type
    protein coding
    RNA name
    AP2 domain transcription factor AP2-L, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0730300 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Sequence:
    Chromosome: 7; NC_004328.3 (1297459..1301454)

    Chromosome 7 - NC_004328.3Genomic Context describing neighboring genes Neighboring gene tRNA pseudouridine synthase D, putative Neighboring gene AP-4 complex subunit beta, putative Neighboring gene IMP1-like protein, putative Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004328.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of an AP2-family protein that is critical for malaria liver stage development. Iwanaga S, et al. PLoS One, 2012. PMID 23144823, Free PMC Article
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP2 domain transcription factor AP2-L, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004328.3 Reference assembly

      Range
      1297459..1301454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349163.1 → XP_001349199.1  AP2 domain transcription factor AP2-L, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349199.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S9VE11, Q8IBF6, W7JW26
      Conserved Domains (2) summary
      pfam00847
      Location:994 → 1046
      AP2; AP2 domain
      pfam14733
      Location:1226 → 1316
      ACDC; AP2-coincident C-terminal
    Nucleotide Protein
    Heading Accession and Version

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