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    PF3D7_1006200 DNA/RNA-binding protein Alba 3 [ Plasmodium falciparum 3D7 ]

    Gene ID: 810221, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1006200
    Gene description
    DNA/RNA-binding protein Alba 3
    Locus tag
    PF3D7_1006200
    See related
    PlasmoDB:PF3D7_1006200; VEuPathDB:PF3D7_1006200
    Gene type
    protein coding
    RNA name
    DNA/RNA-binding protein Alba 3
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1006200 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Sequence:
    Chromosome: 10; NC_037281.1 (262150..262997, complement)

    Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene IMP1-like protein, putative Neighboring gene CCR4-NOT transcription complex subunit 5, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene heptatricopeptide repeat-containing protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037281.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and molecular characterization of an Alba-family protein from human malaria parasite Plasmodium falciparum. Goyal M, et al. Nucleic Acids Res, 2012 Feb. PMID 22006844, Free PMC Article
    2. PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites. Chêne A, et al. Nucleic Acids Res, 2012 Apr. PMID 22167473, Free PMC Article
    3. Transcriptome-wide dynamics of extensive m(6)A mRNA methylation during Plasmodium falciparum blood-stage development. Baumgarten S, et al. Nat Microbiol, 2019 Dec. PMID 31384004, Free PMC Article
    4. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    5. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables RNA binding HDA PubMed 
    enables RNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables mRNA binding HDA PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA N6-methyladenosine methyltransferase complex HDA PubMed 
    located_in extracellular vesicle HDA PubMed 
    located_in food vacuole HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA/RNA-binding protein Alba 3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037281.1 Reference assembly

      Range
      262150..262997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347312.1 → XP_001347348.1  DNA/RNA-binding protein Alba 3 [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347348.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8IJX8
      UniProtKB/TrEMBL
      A0A024V7S2, A0A024X922, A0A0L7K8R1, A0A8S9VLA3, W4J3C4, W7FF58, W7FY69
      Conserved Domains (1) summary
      pfam01918
      Location:14 → 84
      Alba
    Nucleotide Protein
    Heading Accession and Version

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