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    PF3D7_1020400 rRNA (cytosine-C(5))-methyltransferase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810355, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1020400
    Gene description
    rRNA (cytosine-C(5))-methyltransferase, putative
    Locus tag
    PF3D7_1020400
    See related
    PlasmoDB:PF3D7_1020400; VEuPathDB:PF3D7_1020400
    Gene type
    protein coding
    RNA name
    rRNA (cytosine-C(5))-methyltransferase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1020400 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Sequence:
    Chromosome: 10; NC_037281.1 (822602..824593, complement)

    Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene cytoplasmic dynein intermediate chain, putative Neighboring gene ribosomal silencing factor RsfS, putative Neighboring gene conserved Plasmodium membrane protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037281.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables rRNA (cytosine-C5-)-methyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleolus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    rRNA (cytosine-C(5))-methyltransferase, putative
    XP_001347482.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037281.1 Reference assembly

      Range
      822602..824593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347446.1 → XP_001347482.1  rRNA (cytosine-C(5))-methyltransferase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347482.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V738, A0A0L1I9Z2, A0A0L7LZR6, A0A2I0BR22, Q8IJJ8, W7FCH6, W7JBT7
      Conserved Domains (1) summary
      COG0144
      Location:186 → 585
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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