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    PF3D7_1021900 PHAX domain-containing protein, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810370, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1021900
    Gene description
    PHAX domain-containing protein, putative
    Locus tag
    PF3D7_1021900
    See related
    PlasmoDB:PF3D7_1021900; VEuPathDB:PF3D7_1021900
    Gene type
    protein coding
    RNA name
    PHAX domain-containing protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1021900 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Sequence:
    Chromosome: 10; NC_037281.1 (905473..912345, complement)

    Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene schizont egress antigen-1 Neighboring gene RNA-binding protein, putative Neighboring gene methyltransferase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037281.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    5. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables mRNA binding HDA PubMed 
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    PHAX domain-containing protein, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037281.1 Reference assembly

      Range
      905473..912345 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347461.1 → XP_001347497.1  PHAX domain-containing protein, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347497.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L1I6P8, A0A2I0BQL2, Q8IJI4
      Conserved Domains (5) summary
      PTZ00341
      Location:1180 → 1368
      PTZ00341; Ring-infected erythrocyte surface antigen; Provisional
      PTZ00265
      Location:8 → 131
      PTZ00265; multidrug resistance protein (mdr1); Provisional
      sd00045
      Location:1416 → 1447
      ANK; ANK repeat [structural motif]
      pfam10258
      Location:1718 → 1796
      RNA_GG_bind; PHAX RNA-binding domain
      pfam12796
      Location:1388 → 1478
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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