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    PF3D7_1104100 syntaxin, Qa-SNARE family [ Plasmodium falciparum 3D7 ]

    Gene ID: 810566, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1104100
    Gene description
    syntaxin, Qa-SNARE family
    Locus tag
    PF3D7_1104100
    See related
    PlasmoDB:PF3D7_1104100; VEuPathDB:PF3D7_1104100
    Gene type
    protein coding
    RNA name
    syntaxin, Qa-SNARE family
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1104100 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Sequence:
    Chromosome: 11; NC_037282.1 (179461..181128, complement)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene phenylalanine--tRNA ligase beta subunit Neighboring gene chromatin remodeling protein Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plasmodium falciparum secretory pathway: characterization of PfStx1, a plasma membrane Qa-SNARE. Parish LA, et al. Mol Biochem Parasitol, 2009 Apr. PMID 19103232, Free PMC Article
    2. Identification of Plasmodium falciparum family of SNAREs. Ayong L, et al. Mol Biochem Parasitol, 2007 Apr. PMID 17240462
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables SNAP receptor activity RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular protein transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in food vacuole RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    syntaxin, Qa-SNARE family

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      179461..181128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347692.2 → XP_001347728.2  syntaxin, Qa-SNARE family [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347728.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024X7X9, A0A0L1I6J2, A0A2I0C0Y3, B5SPA1, Q8IIW1, W4IFU6, W4J163, W7FDT1, W7JM58
      Conserved Domains (2) summary
      pfam14523
      Location:21 → 123
      Syntaxin_2; Syntaxin-like protein
      cl22856
      Location:258 → 313
      SNARE; SNARE motif
    Nucleotide Protein
    Heading Accession and Version

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