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    PF3D7_1144600 transcription initiation factor IIF subunit beta, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811001, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1144600
    Gene description
    transcription initiation factor IIF subunit beta, putative
    Locus tag
    PF3D7_1144600
    See related
    PlasmoDB:PF3D7_1144600; VEuPathDB:PF3D7_1144600
    Gene type
    protein coding
    RNA name
    transcription initiation factor IIF subunit beta, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1144600 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Sequence:
    Chromosome: 11; NC_037282.1 (1770949..1771902)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene SUMO-activating enzyme subunit 1 Neighboring gene apicoplast import protein Tic20, putative Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    2. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transcription initiation factor IIF subunit beta, putative
    XP_001348125.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      1770949..1771902
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001348089.1 → XP_001348125.1  transcription initiation factor IIF subunit beta, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001348125.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024W4S8, A0A024WKG5, A0A024X6M0, Q8IHS1, W4IWQ2, W7F5A0, W7FWS7, W7J9I4, W7KDZ7
      Conserved Domains (2) summary
      pfam17683
      Location:17 → 97
      TFIIF_beta_N; TFIIF, beta subunit N-terminus
      cl02122
      Location:6 → 224
      TFIIF_beta; Transcription initiation factor IIF, beta subunit
    Nucleotide Protein
    Heading Accession and Version

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