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    PF3D7_1145500 ABC transporter B family member 3, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811009, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1145500
    Gene description
    ABC transporter B family member 3, putative
    Locus tag
    PF3D7_1145500
    See related
    PlasmoDB:PF3D7_1145500; VEuPathDB:PF3D7_1145500
    Gene type
    protein coding
    RNA name
    ABC transporter B family member 3, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1145500 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Sequence:
    Chromosome: 11; NC_037282.1 (1807359..1810130)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich PDZ-binding protein, putative Neighboring gene dynamin-like protein Neighboring gene TMEM65 domain-containing protein, putative Neighboring gene bicoid-interacting protein BIN3, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genetic screen in rodent malaria parasites identifies five new apicoplast putative membrane transporters, one of which is essential in human malaria parasites. Sayers CP, et al. Cell Microbiol, 2018 Jan. PMID 28902970
    2. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. Krogh A, et al. J Mol Biol, 2001 Jan 19. PMID 11152613
    3. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    4. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in apicoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ABC transporter B family member 3, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      1807359..1810130
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001348097.2 → XP_001348133.2  ABC transporter B family member 3, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001348133.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2I0C040, Q8IHR3, W4IGS2
      Conserved Domains (2) summary
      cd03228
      Location:604 → 820
      ABCC_MRP_Like; ATP-binding cassette domain of multidrug resistance protein-like transporters
      COG1132
      Location:237 → 820
      MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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