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    PF3D7_1308900 mRNA-decapping enzyme 2, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814027, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1308900
    Gene description
    mRNA-decapping enzyme 2, putative
    Locus tag
    PF3D7_1308900
    See related
    PlasmoDB:PF3D7_1308900; VEuPathDB:PF3D7_1308900
    Gene type
    protein coding
    RNA name
    mRNA-decapping enzyme 2, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1308900 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_004331.3 (408580..412101, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene tyrosine recombinase Neighboring gene conserved protein, unknown function Neighboring gene 60S ribosomal protein L24, putative Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables hydrolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within deadenylation-dependent decapping of nuclear-transcribed mRNA ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    mRNA-decapping enzyme 2, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      408580..412101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349781.1 → XP_001349817.1  mRNA-decapping enzyme 2, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349817.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q8IEM5, W7FKK7, W7JQI4
      Conserved Domains (2) summary
      cd03672
      Location:130 → 278
      Dcp2p; mRNA decapping enzyme 2 (Dcp2p), the catalytic subunit, and Dcp1p are the two components of the decapping enzyme complex. Decapping is a key step in both general and nonsense-mediated 5'->3' mRNA-decay pathways. Dcp2p contains an all-alpha helical ...
      pfam05026
      Location:41 → 126
      DCP2; Dcp2, box A domain
    Nucleotide Protein
    Heading Accession and Version

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