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    PF3D7_1405400 DNA mismatch repair protein, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811633, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1405400
    Gene description
    DNA mismatch repair protein, putative
    Locus tag
    PF3D7_1405400
    See related
    PlasmoDB:PF3D7_1405400; VEuPathDB:PF3D7_1405400
    Gene type
    protein coding
    RNA name
    DNA mismatch repair protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1405400 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    4
    Sequence:
    Chromosome: 14; NC_037283.1 (185437..190368, complement)

    Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 1, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene COBW domain-containing protein 1, putative Neighboring gene ribonucleoside-diphosphate reductase small chain, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037283.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    2. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 

    General protein information

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    Preferred Names
    DNA mismatch repair protein, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037283.1 Reference assembly

      Range
      185437..190368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001348188.1 → XP_001348224.1  DNA mismatch repair protein, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001348224.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V2F9, A0A024W047, A0A024WKN4, Q8IM40, W4I9P7, W7FNC9, W7JMK9
      Conserved Domains (2) summary
      pfam01624
      Location:217 → 312
      MutS_I; MutS domain I
      cl38936
      Location:1043 → 1233
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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