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    PF3D7_0316700 protein YOP1, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814481, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0316700
    Gene description
    protein YOP1, putative
    Locus tag
    PF3D7_0316700
    See related
    PlasmoDB:PF3D7_0316700; VEuPathDB:PF3D7_0316700
    Gene type
    protein coding
    RNA name
    protein YOP1, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0316700 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_000521.4 (674458..675636)

    Chromosome 3 - NC_000521.4Genomic Context describing neighboring genes Neighboring gene kinetochore protein NUF2, putative Neighboring gene formate-nitrite transporter Neighboring gene 40S ribosomal protein S15A, putative Neighboring gene E3 ubiquitin-protein ligase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000521.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Plasmodium homolog of ER tubule-forming proteins is required for parasite virulence. Shi X, et al. Mol Microbiol, 2020 Sep. PMID 32432369, Free PMC Article
    2. Interrogating the Plasmodium Sporozoite Surface: Identification of Surface-Exposed Proteins and Demonstration of Glycosylation on CSP and TRAP by Mass Spectrometry-Based Proteomics. Swearingen KE, et al. PLoS Pathog, 2016 Apr. PMID 27128092, Free PMC Article
    3. The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. Bowman S, et al. Nature, 1999 Aug 5. PMID 10448855
    4. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    5. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within endoplasmic reticulum organization ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    acts_upstream_of_or_within endoplasmic reticulum tubular network organization ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface HDA PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    protein YOP1, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000521.4 Reference assembly

      Range
      674458..675636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351201.1 → XP_001351237.1  protein YOP1, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351237.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VD08, A0A024VVT3, A0A024WWS2, A0A024XFE6, A0A0L7K6Z5, O77388, W4IQA1, W7FLZ9, W7GC94, W7JIL4, W7KCB5
      Conserved Domains (1) summary
      pfam03134
      Location:101 → 177
      TB2_DP1_HVA22; TB2/DP1, HVA22 family
    Nucleotide Protein
    Heading Accession and Version

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