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    PF3D7_0403900 SET domain protein, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812463, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0403900
    Gene description
    SET domain protein, putative
    Locus tag
    PF3D7_0403900
    See related
    PlasmoDB:PF3D7_0403900; VEuPathDB:PF3D7_0403900
    Gene type
    protein coding
    RNA name
    SET domain protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0403900 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_004318.2 (219087..222838)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene pre-mRNA-splicing factor CLF1, putative Neighboring gene alpha/beta hydrolase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene AP2 domain transcription factor AP2-SP2, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    SET domain protein, putative
    XP_001351351.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      219087..222838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351315.1 → XP_001351351.1  SET domain protein, putative [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024WCS5, A0A024WVP4, A0A024XEE7, A0A2I0BZU9, Q8I1Z0, W4J5H7
      Conserved Domains (2) summary
      PRK00448
      Location:508 → 759
      polC; DNA polymerase III PolC; Validated
      cd10528
      Location:1016 → 1173
      SET_SETD8; SET domain found in SET domain-containing protein 8 (SETD8) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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