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    PF3D7_0412100 30S ribosomal protein S12, mitochondrial, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812585, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0412100
    Gene description
    30S ribosomal protein S12, mitochondrial, putative
    Locus tag
    PF3D7_0412100
    See related
    PlasmoDB:PF3D7_0412100; VEuPathDB:PF3D7_0412100
    Gene type
    protein coding
    RNA name
    30S ribosomal protein S12, mitochondrial, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0412100 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_004318.2 (540188..541198, complement)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene DNA polymerase alpha catalytic subunit A Neighboring gene LITAF-like zinc finger protein, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene phosphopantothenoylcysteine synthetase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic ablation of the mitoribosome in the malaria parasite Plasmodium falciparum sensitizes it to antimalarials that target mitochondrial functions. Ling L, et al. J Biol Chem, 2020 May 22. PMID 32273345, Free PMC Article
    2. A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology. van Esveld SL, et al. mSphere, 2021 Oct 27. PMID 34494883, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within mitochondrial translation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to xenobiotic stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    30S ribosomal protein S12, mitochondrial, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      540188..541198 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351396.1 → XP_001351432.1  30S ribosomal protein S12, mitochondrial, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351432.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024WC42, A0A2I0BZR2, Q9U0G9, W4IP21
      Conserved Domains (1) summary
      PTZ00115
      Location:14 → 335
      PTZ00115; 40S ribosomal protein S12; Provisional
    Nucleotide Protein
    Heading Accession and Version

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