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    PF3D7_0520000 40S ribosomal protein S9, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813016, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0520000
    Gene description
    40S ribosomal protein S9, putative
    Locus tag
    PF3D7_0520000
    See related
    PlasmoDB:PF3D7_0520000; VEuPathDB:PF3D7_0520000
    Gene type
    protein coding
    RNA name
    40S ribosomal protein S9, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0520000 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_004326.2 (828953..829883)

    Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene EELM2 domain-containing protein, putative Neighboring gene conserved protein, unknown function Neighboring gene protein phosphatase PPM9, putative Neighboring gene mediator of RNA polymerase II transcription subunit 17, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004326.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome-wide dynamics of extensive m(6)A mRNA methylation during Plasmodium falciparum blood-stage development. Baumgarten S, et al. Nat Microbiol, 2019 Dec. PMID 31384004, Free PMC Article
    2. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
    3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    4. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    5. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables RNA binding HDA PubMed 
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of RNA N6-methyladenosine methyltransferase complex HDA PubMed 
    located_in nucleus HDA PubMed 
    part_of small-subunit processome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    40S ribosomal protein S9, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004326.2 Reference assembly

      Range
      828953..829883
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351722.1 → XP_001351758.1  40S ribosomal protein S9, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351758.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024UVR9, A0A024WAX6, A0A024WUD1, A0A024XDF9, A0A0L7KH49, Q8I3R0, W4IMI9, W4ITY2, W7G029, W7JST8, W7K9C7
      Conserved Domains (1) summary
      PTZ00155
      Location:1 → 181
      PTZ00155; 40S ribosomal protein S9; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    3J7A_E.1
    6OKK_E.1

    Gene LinkOut

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