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    PF3D7_1239900 vacuolar protein sorting-associated protein 16, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811439, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1239900
    Gene description
    vacuolar protein sorting-associated protein 16, putative
    Locus tag
    PF3D7_1239900
    See related
    PlasmoDB:PF3D7_1239900; VEuPathDB:PF3D7_1239900
    Gene type
    protein coding
    RNA name
    vacuolar protein sorting-associated protein 16, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1239900 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Sequence:
    Chromosome: 12; NC_037284.1 (1678438..1681536, complement)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent zinc metalloprotease FTSH 1 Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene 3-hydroxyisobutyryl-coenzyme A hydrolase, putative Neighboring gene early transcribed membrane protein 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 16, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      1678438..1681536 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350757.1 → XP_001350793.1  vacuolar protein sorting-associated protein 16, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350793.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V4J2, Q8I524
      Conserved Domains (2) summary
      pfam04841
      Location:2 → 570
      Vps16_N; Vps16, N-terminal region
      pfam04840
      Location:667 → 1007
      Vps16_C; Vps16, C-terminal region
    Nucleotide Protein
    Heading Accession and Version

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