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    PF3D7_1248200 pre-mRNA-splicing factor RBM22, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811514, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1248200
    Gene description
    pre-mRNA-splicing factor RBM22, putative
    Locus tag
    PF3D7_1248200
    See related
    PlasmoDB:PF3D7_1248200; VEuPathDB:PF3D7_1248200
    Gene type
    protein coding
    RNA name
    pre-mRNA-splicing factor RBM22, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1248200 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Sequence:
    Chromosome: 12; NC_037284.1 (1977865..1978938)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene tRNA-splicing endonuclease, putative Neighboring gene methyltransferase, putative Neighboring gene conserved protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables U6 snRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables pre-mRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within mRNA cis splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    pre-mRNA-splicing factor RBM22, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      1977865..1978938
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350830.3 → XP_001350866.1  pre-mRNA-splicing factor RBM22, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350866.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A0A144A0M5, Q8I4V2
      UniProtKB/TrEMBL
      A0A024V3D1, A0A024VPJ3, A0A024W397, A0A024X457, A0A0L1ICF0, A0A0L7KFV7, A0A0L7LYU0, W4IDV2, W4J4T3, W7FB69, W7G1B4, W7JUA3, W7K1L6
      Conserved Domains (2) summary
      pfam18345
      Location:159 → 177
      zf_CCCH_4; Zinc finger domain
      cd12292
      Location:221 → 294
      RRM2_La_like; RNA recognition motif 2 in La autoantigen (La or SS-B or LARP3), La-related protein 7 (LARP7 or PIP7S) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8I4V2.1

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