U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CTM1 cytochrome c lysine N-methyltransferase [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856509, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CTM1
    Official Full Name
    cytochrome c lysine N-methyltransferase
    Primary source
    SGD:S000001151
    Locus tag
    YHR109W
    See related
    AllianceGenome:SGD:S000001151; FungiDB:YHR109W; VEuPathDB:YHR109W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables [cytochrome c]-lysine N-methyltransferase activity. Involved in peptidyl-lysine methylation. Located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CTM1 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (330310..332067)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene septin CDC12 Neighboring gene phosphatidylinositol 4-phosphate-binding protein Neighboring gene Erp5p Neighboring gene Uba4p

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cytochrome c methyltransferase, Ctm1p, of yeast. Polevoda B, et al. J Biol Chem, 2000 Jul 7. PMID 10791961
    2. Studies on cytochrome c methylation in yeast. DiMaria P, et al. J Biol Chem, 1979 Jun 10. PMID 220257
    3. A biochemical genomics approach for identifying genes by the activity of their products. Martzen MR, et al. Science, 1999 Nov 5. PMID 10550052
    4. Lysine methylation modulates the protein-protein interactions of yeast cytochrome C Cyc1p. Winter DL, et al. Proteomics, 2015 Jul. PMID 25755154
    5. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables [cytochrome c]-lysine N-methyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables [cytochrome c]-lysine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables [cytochrome c]-lysine N-methyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables histone H3K36 methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables histone H3K4 methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein-lysine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in peptidyl-lysine methylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytochrome c lysine N-methyltransferase
    NP_011977.1
    • Cytochrome c lysine methyltransferase; trimethylates residue 72 of apo-cytochrome c (Cyc1p) in the cytosol; not required for normal respiratory growth

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      330310..332067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179239.1 → NP_011977.1  TPA: cytochrome c lysine N-methyltransferase [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011977.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DL59, P38818, Q66R84
      UniProtKB/TrEMBL
      A6ZT17, B3LSM4, C7GLZ5, C8Z9Q2, N1P9F1
      Conserved Domains (1) summary
      cd10527
      Location:28 → 288
      SET_LSMT; SET domain found in Rubisco large subunit methyltransferase (LSMT) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38818.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools