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    CG12662 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31825, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG12662provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030074
    Locus tag
    Dmel_CG12662
    See related
    AllianceGenome:FB:FBgn0030074
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12662
    Orthologs
    all
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    Genomic context

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    See CG12662 in Genome Data Viewer
    Location:
    8C1-8C1; 1-26 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8983634..8984442, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8877667..8878223, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene retinal degeneration A Neighboring gene long non-coding RNA:CR43836 Neighboring gene mir-4964 stem loop Neighboring gene uncharacterized protein Neighboring gene mir-31b stem loop Neighboring gene Nostrin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Joint estimates of quantitative trait locus effect and frequency using synthetic recombinant populations of Drosophila melanogaster. Macdonald SJ, et al. Genetics, 2007 Jun. PMID 17435224, Free PMC Article
    2. FlyXCDB-A Resource for Drosophila Cell Surface and Secreted Proteins and Their Extracellular Domains. Pei J, et al. J Mol Biol, 2018 Sep 14. PMID 29890119
    3. Genomic organization of gypsy chromatin insulators in Drosophila melanogaster. Ramos E, et al. Genetics, 2006 Apr. PMID 16452134, Free PMC Article
    4. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12662-PA
    CG12662-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      8983634..8984442 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001369967.1 → NP_001356935.1  uncharacterized protein Dmel_CG12662, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4D6K2Q4
      Conserved Domains (1) summary
      smart00697
      Location:90 → 184
      DM8; Repeats found in several Drosophila proteins

    2. NM_132285.2 → NP_572513.1  uncharacterized protein Dmel_CG12662, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572513.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W3A5
      Related
      FBpp0071207
      Conserved Domains (1) summary
      smart00697
      Location:65 → 159
      DM8; Repeats found in several Drosophila proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A4D6K2Q4 A0A4D6K2Q4
    Q9W3A5 Q9W3A5

    Gene LinkOut

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