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    CG6739 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34037, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6739provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031926
    Locus tag
    Dmel_CG6739
    See related
    AllianceGenome:FB:FBgn0031926
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6739
    Summary
    Predicted to be active in plasma membrane. Is expressed in several structures, including clypeo-labral primordium; dorsal epidermis primordium; embryonic dorsal epidermis; embryonic epipharynx; and embryonic head epidermis. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6739 in Genome Data Viewer
    Location:
    28B4-28B4; 2-27 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (7608389..7616533)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (7608389..7616533)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45370 Neighboring gene Cytochrome P450 4d21 Neighboring gene long non-coding RNA:CR44799 Neighboring gene long non-coding RNA:CR44800

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article
    2. Sir2 Acts through Hepatocyte Nuclear Factor 4 to maintain insulin Signaling and Metabolic Homeostasis in Drosophila. Palu RA, et al. PLoS Genet, 2016 Apr. PMID 27058248, Free PMC Article
    3. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
    4. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article
    5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6739-PA
    CG6739-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      7608389..7616533
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273281.1 → NP_001260210.1  uncharacterized protein Dmel_CG6739, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260210.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PCG9, Q6NPA8
      Conserved Domains (2) summary
      cd07066
      Location:314 → 427
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cd00112
      Location:432 → 464
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

    2. NM_135286.2 → NP_609130.1  uncharacterized protein Dmel_CG6739, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609130.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VLZ6
      Related
      FBpp0079096
      Conserved Domains (2) summary
      cd07066
      Location:314 → 427
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cd00112
      Location:432 → 464
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PCG9 M9PCG9
    Q9VLZ6 Q9VLZ6

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