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    CG17625 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42678, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17625provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039002
    Locus tag
    Dmel_CG17625
    See related
    AllianceGenome:FB:FBgn0039002
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17625
    Summary
    Predicted to be involved in regulation of intracellular signal transduction. Orthologous to human SAMD5 (sterile alpha motif domain containing 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17625 in Genome Data Viewer
    Location:
    94C1-94C1; 3-76 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22686849..22687407)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18512571..18513129)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene wide awake Neighboring gene Glutamate-cysteine ligase modifier subunit Neighboring gene wolfram syndrome 1 Neighboring gene Nucleoporin 133kD

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Circadian regulation of glutathione levels and biosynthesis in Drosophila melanogaster. Beaver LM, et al. PLoS One, 2012. PMID 23226288, Free PMC Article
    2. Stem Cell-Intrinsic, Seven-up-Triggered Temporal Factor Gradients Diversify Intermediate Neural Progenitors. Ren Q, et al. Curr Biol, 2017 May 8. PMID 28434858
    3. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in regulation of intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17625-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22686849..22687407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142821.3 → NP_651078.1  uncharacterized protein Dmel_CG17625 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651078.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4QPU2, Q9VCW5
      Related
      FBpp0083694
      Conserved Domains (2) summary
      cd09527
      Location:2 → 64
      SAM_Samd5; SAM domain of Samd5 subfamily
      smart00454
      Location:6 → 64
      SAM; Sterile alpha motif
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VCW5 Q9VCW5

    Gene LinkOut

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