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    CG15642 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32476, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG15642provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030642
    Locus tag
    Dmel_CG15642
    See related
    AllianceGenome:FB:FBgn0030642
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15642
    Orthologs
    all
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    Genomic context

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    See CG15642 in Genome Data Viewer
    Location:
    13C4-13C4; 1-50 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15466184..15467757, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (15360217..15361790, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Adenosylhomocysteinase Neighboring gene uncharacterized protein Neighboring gene shattered Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Grip128 Neighboring gene ALG14, UDP-N-acetylglucosaminyltransferase subunit Neighboring gene maternal haploid

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi. Fisher WW, et al. Genetics, 2023 Apr 6. PMID 36652461, Free PMC Article
    2. Screen for mitochondrial DNA copy number maintenance genes reveals essential role for ATP synthase. Fukuoh A, et al. Mol Syst Biol, 2014 Jun 21. PMID 24952591, Free PMC Article
    3. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15642-PA
    CG15642-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      15466184..15467757 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298343.1 → NP_001285272.1  uncharacterized protein Dmel_CG15642, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285272.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXV0
      Conserved Domains (1) summary
      pfam09799
      Location:21 → 121
      Transmemb_17; Predicted membrane protein

    2. NM_132800.2 → NP_573028.1  uncharacterized protein Dmel_CG15642, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_573028.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXV0
      Related
      FBpp0073892
      Conserved Domains (1) summary
      pfam09799
      Location:21 → 121
      Transmemb_17; Predicted membrane protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VXV0 Q9VXV0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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