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    CG15643 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32489, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15643provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030654
    Locus tag
    Dmel_CG15643
    See related
    AllianceGenome:FB:FBgn0030654
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG32583; Dmel\CG15643
    Summary
    Predicted to be involved in positive regulation of SREBP signaling pathway. Is expressed in organism. Orthologous to human SPRING1 (SREBF pathway regulator in golgi 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15643 in Genome Data Viewer
    Location:
    13D3-13D3; 1-50 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15570380..15572149, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (15464413..15466182, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Nascent-associated complex beta-subunit-like, testis 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila ELYS regulates Dorsal dynamics during development. Mehta SJK, et al. J Biol Chem, 2020 Feb 21. PMID 31941789, Free PMC Article
    2. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article
    3. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in positive regulation of SREBP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15643-PA
    CG15643-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      15570380..15572149 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_176736.2 → NP_788909.1  uncharacterized protein Dmel_CG15643, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788909.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXT6
      Related
      FBpp0073888
      Conserved Domains (1) summary
      pfam10218
      Location:74 → 197
      DUF2054; Uncharacterized conserved protein (DUF2054)

    2. NM_001298347.1 → NP_001285276.1  uncharacterized protein Dmel_CG15643, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285276.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXT6
      Conserved Domains (1) summary
      pfam10218
      Location:74 → 197
      DUF2054; Uncharacterized conserved protein (DUF2054)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VXT6 Q9VXT6

    Gene LinkOut

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