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    cyr cypher [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31733, updated on 9-Dec-2024

    Summary

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    Official Symbol
    cyrprovided by FlyBase
    Official Full Name
    cypherprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030001
    Locus tag
    Dmel_CG15335
    See related
    AllianceGenome:FB:FBgn0030001
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15335; CG15338; Dmel\CG15335
    Summary
    Predicted to be involved in epithelial cell morphogenesis. Predicted to be located in membrane. Predicted to be active in apical plasma membrane. Is expressed in several structures, including embryonic dorsal epidermis; embryonic head sensory system; embryonic labial sensory complex; gut section; and labial sensory complex primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See cyr in Genome Data Viewer
    Location:
    7D6-7D14; 1-22 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8121280..8135713, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8015313..8029746, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Glutamate-cysteine ligase catalytic subunit Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Smad on X Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A family of genes encoding zona pellucida (ZP) domain proteins is expressed in various epithelial tissues during Drosophila embryogenesis. Jaźwińska A, et al. Gene Expr Patterns, 2004 Jul. PMID 15183308
    2. Zona pellucida domain proteins remodel the apical compartment for localized cell shape changes. Fernandes I, et al. Dev Cell, 2010 Jan 19. PMID 20152178
    3. Trichomes on female reproductive tract: rapid diversification and underlying gene regulatory network in Drosophila suzukii and its related species. Tanaka KM, et al. BMC Ecol Evol, 2022 Jul 28. PMID 35902820, Free PMC Article
    4. dusky-like is required to maintain the integrity and planar cell polarity of hairs during the development of the Drosophila wing. Adler PN, et al. Dev Biol, 2013 Jul 1. PMID 23623898, Free PMC Article
    5. Laser microdissection of sensory organ precursor cells of Drosophila microchaetes. Buffin E, et al. PLoS One, 2010 Feb 19. PMID 20174573, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in epithelial cell morphogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in apical plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cypher
    Names
    CG15335-PB
    CG15335-PC
    CG15335-PD
    cyr-PB
    cyr-PC
    cyr-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      8121280..8135713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132214.2 → NP_572442.1  cypher, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572442.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86P22, Q9W3K2
      Related
      FBpp0071141
      Conserved Domains (1) summary
      smart00241
      Location:82 → 344
      ZP; Zona pellucida (ZP) domain

    2. NM_001298076.1 → NP_001285005.1  cypher, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285005.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86P22, X2JCY5
      Conserved Domains (1) summary
      PHA03146
      Location:234 → 318
      PHA03146; helicase-primase primase subunit; Provisional

    3. NM_001298075.1 → NP_001285004.1  cypher, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285004.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86P22, Q9W3K2
      Conserved Domains (1) summary
      smart00241
      Location:82 → 344
      ZP; Zona pellucida (ZP) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q86P22 Q86P22
    Q9W3K2 Q9W3K2
    X2JCY5 X2JCY5

    Gene LinkOut

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