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    Sprn Spermitin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39344, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Sprnprovided by FlyBase
    Official Full Name
    Spermitinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036218
    Locus tag
    Dmel_CG14128
    See related
    AllianceGenome:FB:FBgn0036218
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG14128; Dmel\CG14128; sprn
    Summary
    Predicted to be involved in intracellular transport. Located in Nebenkern. Is expressed in adult head and testis. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Sprn in Genome Data Viewer
    Location:
    68E3-68E3; 3-37 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11879115..11881182)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11872215..11874282)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Coiled-coil domain containing protein 151 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Spermitin: a novel mitochondrial protein in Drosophila spermatids. Chen JV, et al. PLoS One, 2014. PMID 25265054, Free PMC Article
    2. Deficiency of ValRS-m Causes Male Infertility in Drosophila melanogaster. Duan X, et al. Int J Mol Sci, 2024 Jul 8. PMID 39000597, Free PMC Article
    3. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
    4. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Nebenkern IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermitin
    Names
    CG14128-PB
    CG14128-PC
    CG14128-PE
    CG14128-PF
    Sprn-PB
    Sprn-PC
    Sprn-PE
    Sprn-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      11879115..11881182
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169954.2 → NP_001163425.2  spermitin, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163425.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JHY2, Q4V542
      Conserved Domains (1) summary
      cl17171
      Location:446 → 562
      PH-like; Pleckstrin homology-like domain

    2. NM_140262.2 → NP_648519.2  spermitin, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648519.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V542, Q9VTQ2
      Conserved Domains (1) summary
      cl17171
      Location:446 → 545
      PH-like; Pleckstrin homology-like domain

    3. NM_001169955.1 → NP_001163426.1  spermitin, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163426.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V503, Q4V542
      Conserved Domains (1) summary
      cl17171
      Location:428 → 544
      PH-like; Pleckstrin homology-like domain

    4. NM_001169953.1 → NP_001163424.1  spermitin, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163424.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V4X9, Q4V542
      Conserved Domains (1) summary
      cl17171
      Location:428 → 527
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JHY2 E1JHY2
    Q4V4X9 Q4V4X9
    Q4V503 Q4V503
    Q9VTQ2 Q9VTQ2

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