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    yjfF galactofuranose ABC transporter putative membrane subunit YjtF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948754, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yjfF
    Official Full Name
    galactofuranose ABC transporter putative membrane subunit YjtF
    Primary source
    ECOCYC:EG12439
    Locus tag
    b4231
    See related
    ASAP:ABE-0013840
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4226
    Summary
    Putative YjfF-YtfTRQ ABC transport system. [More information is available at EcoGene: EG12439]. YjfF is a membrane component of a predicted sugar ABC transporter. [More information is available at EcoCyc: EG12439].
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    Genomic context

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    Sequence:
    NC_000913.3 (4453583..4454578)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene galactofuranose ABC transporter periplasmic binding protein Neighboring gene galactofuranose ABC transporter putative ATP binding subunit Neighboring gene galactofuranose ABC transporter putative membrane subunit YtfT Neighboring gene fructose-1,6-bisphosphatase 1 Neighboring gene UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence of the Escherichia coli fructose-1,6-bisphosphatase gene. Hamilton WD, et al. Nucleic Acids Res, 1988 Sep 12. PMID 2843822, Free PMC Article
    2. Furanose-specific sugar transport: characterization of a bacterial galactofuranose-binding protein. Horler RS, et al. J Biol Chem, 2009 Nov 6. PMID 19744923, Free PMC Article
    3. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
    4. The Escherichia coli ATP-binding cassette (ABC) proteins. Linton KJ, et al. Mol Microbiol, 1998 Apr. PMID 9593292
    5. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables primary active transmembrane transporter activity RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in hexose import across plasma membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within transmembrane transport RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactofuranose ABC transporter putative membrane subunit YjtF
    NP_418652.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4453583..4454578
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418652.2 galactofuranose ABC transporter putative membrane subunit YjtF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418652.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7IG70, A0A8T5YDQ0
      Conserved Domains (1) summary
      PRK11618
      Location:1 → 317
      PRK11618; inner membrane ABC transporter permease protein YjfF; Provisional
    Nucleotide Protein
    Heading Accession and Version

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