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    csiE stationary phase-inducible protein CsiE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947009, updated on 3-Dec-2024

    Summary

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    Official Symbol
    csiE
    Official Full Name
    stationary phase-inducible protein CsiE
    Primary source
    ECOCYC:G7329
    Locus tag
    b2535
    See related
    ASAP:ABE-0008346
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    csi-16; ECK2532
    Summary
    Regulation has been described . [More information is available at EcoCyc: G7329].
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    Genomic context

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    Sequence:
    NC_000913.3 (2665435..2666715)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Nus factor SuhB Neighboring gene putative peptidase Neighboring gene putative 3-phenylpropionate transporter Neighboring gene protein IroK Neighboring gene DNA-binding transcriptional dual regulator HcaR Neighboring gene putative 3-phenylpropionate/cinnamate dioxygenase subunit alpha Neighboring gene putative 3-phenylpropionate/cinnamate dioxygenase subunit beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulatory characteristics and promoter analysis of csiE, a stationary phase-inducible gene under the control of sigma S and the cAMP-CRP complex in Escherichia coli. Marschall C, et al. Mol Microbiol, 1995 Oct. PMID 8596457
    2. Identification and characterization of stationary phase-inducible genes in Escherichia coli. Weichart D, et al. Mol Microbiol, 1993 Oct. PMID 7934831
    3. Differential ability of sigma(s) and sigma70 of Escherichia coli to utilize promoters containing half or full UP-element sites. Typas A, et al. Mol Microbiol, 2005 Jan. PMID 15612932
    4. The sequence upstream of the -10 consensus sequence modulates the strength and induction time of stationary-phase promoters in Escherichia coli. Miksch G, et al. Appl Microbiol Biotechnol, 2005 Dec. PMID 16088348
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    stationary phase-inducible protein CsiE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2665435..2666715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417030.2 stationary phase-inducible protein CsiE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417030.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1KHF3
      Conserved Domains (1) summary
      PRK11564
      Location:1 → 426
      PRK11564; stationary phase inducible protein CsiE; Provisional
    Nucleotide Protein
    Heading Accession and Version

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