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    yfjY RadC-like JAB domain-containing protein YfjY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947125, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfjY
    Official Full Name
    RadC-like JAB domain-containing protein YfjY
    Primary source
    ECOCYC:G7379
    Locus tag
    b2644
    See related
    ASAP:ABE-0008706
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2640
    Summary
    When placed on a multicopy plasmid, this gene creates a mutator phenotype . [More information is available at EcoCyc: G7379].
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    Genomic context

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    Sequence:
    NC_000913.3 (2776386..2776868)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene putative antirestriction protein YfjX Neighboring gene DUF987 domain-containing protein YpjJ Neighboring gene putative antitoxin of the YpjF-YfjZ toxin-antitoxin system

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Single-cell analysis reveals that cryptic prophage protease LfgB protects Escherichia coli during oxidative stress by cleaving antitoxin MqsA. Fernández-García L, et al. Microbiol Spectr, 2024 Feb 6. PMID 38206055, Free PMC Article
    2. Identification of mutator genes and mutational pathways in Escherichia coli using a multicopy cloning approach. Yang H, et al. Mol Microbiol, 2004 Jul. PMID 15225322
    3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to heat IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within cellular response to reactive oxygen species IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within cellular stress response to acidic pH IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RadC-like JAB domain-containing protein YfjY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2776386..2776868
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417131.1 RadC-like JAB domain-containing protein YfjY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417131.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P52140
      Conserved Domains (1) summary
      COG2003
      Location:1 → 160
      RadC; DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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