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    tfaP putative tail fiber assembly protein TfaP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945724, updated on 3-Dec-2024

    Summary

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    Official Symbol
    tfaP
    Official Full Name
    putative tail fiber assembly protein TfaP
    Primary source
    ECOCYC:G6598
    Locus tag
    b1155
    See related
    ASAP:ABE-0003878
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1141; ymfS
    Summary
    tfaP is expectd to be transcriptionally silenced in the P-element P(-) orientation, although is may not be expressed and is not expected to be functional even if expressed since e14 does not produce infective virions (Plasterk, 1984; Mehta, 2005). [More information is available at EcoGene: EG14337].
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    Genomic context

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    Sequence:
    NC_000913.3 (1208132..1208545)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene DUF2313 domain-containing protein YmfQ Neighboring gene protein StfP Neighboring gene putative tail fiber assembly protein TfaE Neighboring gene pseudo Neighboring gene site-specific DNA recombinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The invertible P-DNA segment in the chromosome of Escherichia coli. Plasterk RH, et al. EMBO J, 1985 Jan. PMID 3894006, Free PMC Article
    2. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
    3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    putative tail fiber assembly protein TfaP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1208132..1208545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415673.1 putative tail fiber assembly protein TfaP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415673.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P09154
      Conserved Domains (1) summary
      cl17077
      Location:60 → 133
      Caudo_TAP; Caudovirales tail fibre assembly protein, lambda gpK
    Nucleotide Protein
    Heading Accession and Version

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