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    ypfJ uncharacterized protein YpfJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946956, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ypfJ
    Official Full Name
    uncharacterized protein YpfJ
    Primary source
    ECOCYC:G7298
    Locus tag
    b2475
    See related
    ASAP:ABE-0008153
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2471
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    Genomic context

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    Sequence:
    NC_000913.3 (2595874..2596737, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene esterase YpfH Neighboring gene tRNA(Met) cytidine acetyltransferase Neighboring gene phosphoribosylaminoimidazole-succinocarboxamide synthase Neighboring gene outer membrane protein assembly factor BamC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein YpfJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2595874..2596737 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416970.1 uncharacterized protein YpfJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416970.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AI41
      Conserved Domains (1) summary
      pfam04228
      Location:1 → 283
      Zn_peptidase; Putative neutral zinc metallopeptidase
    Nucleotide Protein
    Heading Accession and Version

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