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    yiiE putative DNA-binding transcriptional regulator YiiE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948386, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yiiE
    Official Full Name
    putative DNA-binding transcriptional regulator YiiE
    Primary source
    ECOCYC:EG11854
    Locus tag
    b3889
    See related
    ASAP:ABE-0012696
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3882
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    Genomic context

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    Sequence:
    NC_000913.3 (4079291..4079509)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene alpha-D-glucose-1-phosphate phosphatase YihX Neighboring gene PF03631 family membrane protein YihY Neighboring gene D-aminoacyl-tRNA deacylase Neighboring gene putative fatty acid biosynthesis enzyme FabY Neighboring gene protein YiiF Neighboring gene formate dehydrogenase formation protein Neighboring gene formate dehydrogenase O subunit gamma

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of Escherichia coli mutants exhibiting altered response to thymol. Shapira R, et al. Microb Drug Resist, 2007 Fall. PMID 17949301
    2. Comparison of the PhoPQ regulon in Escherichia coli and Salmonella typhimurium. Monsieurs P, et al. J Mol Evol, 2005 Apr. PMID 15883881
    3. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator YiiE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4079291..4079509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418325.4 putative DNA-binding transcriptional regulator YiiE [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2A3W8R8, A0AAI8H580
      Conserved Domains (1) summary
      cd21631
      Location:4 → 45
      RHH_CopG_NikR-like; ribbon-helix-helix domains of transcription repressor CopG, nickel responsive transcription factor NikR, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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