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    alsE D-allulose-6-phosphate 3-epimerase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948595, updated on 17-Dec-2024

    Summary

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    Official Symbol
    alsE
    Official Full Name
    D-allulose-6-phosphate 3-epimerase
    Primary source
    ECOCYC:EG11957
    Locus tag
    b4085
    See related
    ASAP:ABE-0013382
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4078; yjcU
    Summary
    Allulose-6-phosphate 3-epimerase catalyzes the final step in the degradation of D-allose, the conversion of D-allulose-6-phosphate to D-fructose-6-phosphate, which feeds into the glycolysis pathway . [More information is available at EcoCyc: EG11957].
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    Genomic context

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    Sequence:
    NC_000913.3 (4307783..4308478, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative lipoprotein YtcA Neighboring gene linear primary-alkylsulfatase Neighboring gene D-allose kinase Neighboring gene D-allose ABC transporter membrane subunit Neighboring gene D-allose ABC transporter ATP binding subunit Neighboring gene D-allose ABC transporter periplasmic binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. D-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose. Poulsen TS, et al. J Bacteriol, 1999 Nov. PMID 10559180, Free PMC Article
    2. Structural basis for substrate specificity in phosphate binding (beta/alpha)8-barrels: D-allulose 6-phosphate 3-epimerase from Escherichia coli K-12. Chan KK, et al. Biochemistry, 2008 Sep 9. PMID 18700786, Free PMC Article
    3. The D-allose operon of Escherichia coli K-12. Kim C, et al. J Bacteriol, 1997 Dec. PMID 9401019, Free PMC Article
    4. Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes. Blattner FR, et al. Nucleic Acids Res, 1993 Nov 25. PMID 8265357, Free PMC Article
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables D-ribulose-phosphate 3-epimerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables allulose 6-phosphate 3-epimerase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables allulose 6-phosphate 3-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables metal ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in D-allose catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within D-allose catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in carbohydrate metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in pentose-phosphate shunt, non-oxidative branch IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    D-allulose-6-phosphate 3-epimerase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4307783..4308478 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418509.1 D-allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418509.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H2VET7, Q1R3H5
      Conserved Domains (1) summary
      PRK09722
      Location:1 → 227
      PRK09722; allulose-6-phosphate 3-epimerase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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