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    slp starvation lipoprotein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948022, updated on 3-Dec-2024

    Summary

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    Official Symbol
    slp
    Official Full Name
    starvation lipoprotein
    Primary source
    ECOCYC:EG11890
    Locus tag
    b3506
    See related
    ASAP:ABE-0011451
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3490
    Summary
    EvgAS regulon. [More information is available at EcoGene: EG11890]. Slp (starvation lipoprotein) is the product of the slp gene which forms an operon with the downstream gene dctR . [More information is available at EcoCyc: EG11890].
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    Genomic context

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    Sequence:
    NC_000913.3 (3653961..3654527)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene arsenate reductase Neighboring gene pseudo Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative DNA-binding transcriptional regulator DctR Neighboring gene inner membrane protein YhiD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of new genes regulated by the marRAB operon in Escherichia coli. Seoane AS, et al. J Bacteriol, 1995 Feb. PMID 7836283, Free PMC Article
    2. Classification and strength measurement of stationary-phase promoters by use of a newly developed promoter cloning vector. Shimada T, et al. J Bacteriol, 2004 Nov. PMID 15489422, Free PMC Article
    3. Genome-wide comparison of phage M13-infected vs. uninfected Escherichia coli. Karlsson F, et al. Can J Microbiol, 2005 Jan. PMID 15782232
    4. Investigating the surface properties of Escherichia coli under glucose controlled conditions and its effect on aggregation. Eboigbodin KE, et al. Langmuir, 2007 Jun 5. PMID 17497900
    5. Purification and analysis of expression of the stationary phase-inducible slp lipoprotein in Escherichia coli: role of the Mar system. Price GP, et al. FEMS Microbiol Lett, 2000 Dec 1. PMID 11094278

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    starvation lipoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3653961..3654527
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417963.4 starvation lipoprotein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417963.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9ARM4, A0A8H9XR04
      Conserved Domains (1) summary
      TIGR00752
      Location:2 → 184
      slp; outer membrane lipoprotein, Slp family
    Nucleotide Protein
    Heading Accession and Version

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