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    tfaD putative tail fiber assembly protein TfaD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945171, updated on 3-Dec-2024

    Summary

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    Official Symbol
    tfaD
    Official Full Name
    putative tail fiber assembly protein TfaD
    Primary source
    ECOCYC:G6315
    Locus tag
    b0561
    See related
    ASAP:ABE-0001917
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0553; ybcX
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    Genomic context

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    Sequence:
    NC_000913.3 (581534..582097)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF3950 domain-containing protein YlcI Neighboring gene putative DNA-packaging protein NohD Neighboring gene pseudo Neighboring gene pseudo Neighboring gene protein TfaX

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Temporal gene-expression in Escherichia coli K-12 biofilms. Domka J, et al. Environ Microbiol, 2007 Feb. PMID 17222132
    2. Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Rooney JP, et al. Genomics, 2009 Jan. PMID 18824089, Free PMC Article
    3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    putative tail fiber assembly protein TfaD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      581534..582097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518755.1 putative tail fiber assembly protein TfaD [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      Conserved Domains (1) summary
      COG5525
      Location:1 → 187
      YbcX; Phage terminase, large subunit GpA [Mobilome: prophages, transposons]
    Nucleotide Protein
    Heading Accession and Version

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