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    yaeF peptidase C92 family protein YaeF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944892, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yaeF
    Official Full Name
    peptidase C92 family protein YaeF
    Primary source
    ECOCYC:EG12138
    Locus tag
    b0193
    See related
    ASAP:ABE-0000655
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0193; yaeK
    Summary
    First 20 aa are predicted to be a type II signal peptide. [More information is available at EcoGene: EG12138]. The protein is a member of a family of bacterial proteins (the YaeF/YiiX family) that defines one subset of the NlpC/P60 protein superfamily . [More information is available at EcoCyc: EG12138].
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    Genomic context

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    Sequence:
    NC_000913.3 (216179..217003, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YaeQ Neighboring gene peptidyl-tRNA hydrolase, ribosome rescue factor Neighboring gene sensor lipoprotein NlpE Neighboring gene proline--tRNA ligase Neighboring gene tRNA m(6)t(6)A37 methyltransferase Neighboring gene sensor lipoprotein RcsF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and sequence of the drpA gene from Escherichia coli. Zhou Z, et al. J Bacteriol, 1990 Jan. PMID 1688424, Free PMC Article
    2. Overproduction of NlpE, a new outer membrane lipoprotein, suppresses the toxicity of periplasmic LacZ by activation of the Cpx signal transduction pathway. Snyder WB, et al. J Bacteriol, 1995 Aug. PMID 7635808, Free PMC Article
    3. Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs. Eriani G, et al. Nature, 1990 Sep 13. PMID 2203971
    4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables cysteine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    peptidase C92 family protein YaeF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      216179..217003 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414735.4 peptidase C92 family protein YaeF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414735.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN3H046
      Conserved Domains (1) summary
      PRK11479
      Location:1 → 274
      PRK11479; YaeF family permuted papain-like enzyme
    Nucleotide Protein
    Heading Accession and Version

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