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    prkB putative phosphoribulokinase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947862, updated on 17-Dec-2024

    Summary

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    Official Symbol
    prkB
    Official Full Name
    putative phosphoribulokinase
    Primary source
    ECOCYC:EG12365
    Locus tag
    b3355
    See related
    ASAP:ABE-0010962
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3343; yhfF
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    Genomic context

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    Sequence:
    NC_000913.3 (3484490..3485359)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ATP-binding protein YheS Neighboring gene putative hydrolase YheT Neighboring gene PF06794 family protein YheU Neighboring gene OsmC family protein YhfA Neighboring gene DNA-binding transcriptional dual regulator CRP

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The nucleotide sequence of the Escherichia coli crp divergent RNA and an overlapping ORF. Bhasin R, et al. Biochim Biophys Acta, 1991 Dec 2. PMID 1756168
    2. Large scale bacterial gene discovery by similarity search. Robison K, et al. Nat Genet, 1994 Jun. PMID 7920643
    3. New genes in old sequence: a strategy for finding genes in the bacterial genome. Borodovsky M, et al. Trends Biochem Sci, 1994 Aug. PMID 7940673
    4. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphoribulokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative phosphoribulokinase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3484490..3485359
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417814.1 putative phosphoribulokinase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417814.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A776QX20
      Conserved Domains (1) summary
      PRK15453
      Location:1 → 288
      PRK15453; phosphoribulokinase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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